Open data resources in the biomedical domain

Latest Version

Version

0.2.3

Update

June 20, 2022

Size

895KiB

Developer

FAIR-biomed Extension

Vasts amounts of biomedical data are stored in open databases and knowledge-bases. Data in these resources are intended to be findable, accessible, interoperable, and reusable (FAIR). However, integrating relevant parts within a specific project can be a challenge. FAIR-biomed works inside the browser to bring open data directly to specific research situations.

On any page in the browser, highlight some text. Press Ctr+Shift+Z or open a context menu (right-click) and select FAIR-biomed. A new box should appear prompting you to choose a data source to query.

Starting from a gene name, for example, you can fetch a general summary from NCBI Gene, related publications from PubMed or Europe PMC, mouse phenotypes from the International Mouse Phenotyping Consortium, or pathways from Reactome. The extension provides links to 20+ resources.

Source Manifest.json

{"update_url": "https://clients2.google.com/service/update2/crx", "name": "FAIR-biomed", "short_name": "FAIR-biomed", "version": "0.2.3", "description": "Open data resources in the biomedical domain", "permissions": ["storage", "contextMenus"], "web_accessible_resources": [ { "resources": [ "library/logo/*", "resources/fa/*", "resources/images/*" ], "matches": [ "" ] } ], "background": { "service_worker": "service_worker.js" }, "content_scripts": [{ "matches": [""], "css": ["css/fair.css"], "js": ["resources/bundle.js", "js/common.js", "js/content.js"] }], "options_page": "html/options.html", "action": { "default_popup": "html/popup.html", "default_action": { "32": "resources/images/fair-biomed-32.png", "128": "resources/images/fair-biomed-128.png" } }, "icons": { "32": "resources/images/fair-biomed-32.png", "128": "resources/images/fair-biomed-128.png" }, "manifest_version": 3}

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FAIR-biomed

Open data resources in the biomedical domain

Latest Version

FAIR-biomed Extension

Source Manifest.json

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